MacBeath Lab
Harvard UniversityDepartment of Chemistry & Chemical BiologyContact usfind us
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functional proteomics
small molecule discovery
protein profiling

Biology
SH2/PTB domains
PDZ domains
cytokines and human disease

Technology
protein microarrays
lysate microarrays
mass spectrometry

Projects
Jack Allen
Elsa Beyer
Bryan Chang
Jiunn-Ren Chen
Alexei Finski
Andrew Gordus
Ethan Karp
Alexis Kaushansky
Tanya Knickerbocker
Jordan Krall
Mark Sevecka
Michael Stiffler
Alejandro Yadlin

Overview

Most proteins that regulate intracellular processes are constructed in a modular fashion from a combination of interaction and catalytic domains. Interaction domains mediate the formation of multi-protein complexes that confine signaling proteins to appropriate subcellular locations and help determine the specificity of enzyme-substrate interactions. In addition, extracellular protein domains mediate interactions between adjacent cells and help control higher order processes such as the formation of nerve synapses in the brain. To date, biologists and biochemists have typically studied protein-protein interactions one at a time. While reductionism has provided a detailed understanding of individual components, it has been less successful in uncovering the complex function of biological systems. The goal of my lab is to identify, characterize, and perturb large collections of proteins or protein domains as a first step in understanding how the cell exploits molecular recognition to regulate complex processes such as protein trafficking, intercellular communication, growth factor signaling, and apoptosis.

There are three main areas of research in my group. While each of these areas can be approached independently, there is a logical flow from one to the next. The goal of my lab is to apply this overall strategy to the systems-based study of entire protein families or protein networks.

functional proteomicssmall molecule discoveryprotein profiling